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Computationally solving eigenvalue problems is a central problem in numerical analysis and as such has been the subject of extensive study. In this thesis we present four different methods to compute eigenvalues, each with its own characteristics, strengths and weaknesses. After formally introducing the methods we use them in various numerical experiments to test speed of convergence, stability as well as performance when used to compute eigenfaces, denoise images and compute the eigenvector centrality measure of a graph.
RNA tertiary contact interactions between RNA tetraloops and their receptors stabilize the folding of ribosomal RNA and support the maturation of the ribosome. Here we use FRET assisted structure prediction to develop structural models of two ribosomal tertiary contacts, one consisting of a kissing loop and a GAAA tetraloop and one consisting of the tetraloop receptor (TLR) and a GAAA tetraloop. We build bound and unbound states of the ribosomal contacts de novo, label the RNA in silico and compute FRET histograms based on MD simulations and accessible contact volume (ACV) calculations. The predicted mean FRET efficiency from molecular dynamics (MD) simulations and ACV determination show agreement for the KL-TLGAAA construct. The KL construct revealed too high FRET efficiency and artificial dye behavior, which requires further investigation of the model. In the case of the TLR, the importance of the correct dye and construct parameters in the modeling was shown, which also leads to a renewed modeling. This hybrid approach of experiment and simulation will promote the elucidation of dynamic RNA tertiary contacts and accelerate the discovery of novel RNA interactions as potential future drug targets.
The research of this thesis aims to analyze how a specific CSR approach from the Adidas Group on sustainability is perceived globally based on an analysis of the movements on the stock market combined with a sentiment analysis of tweet activities on Twitter. The thesis analyzed both positive feedback and critic from customers worldwide regarding the approach and other initiatives from the Adidas Group and their partner Parley for the Oceans, a non-governmental organization working towards a more sustainable world.
The occurence of prostate cancer (PCa) has been consistently rising since three decades and remains the third leading cause of cancer-related deaths after lung and bowel cancer in Germany. Despite of new methods of early detection, such as prostate-specific antigen (PSA) testing, it persists to be the most common cancer in german men with over 63,400 new diagnoses in Germany every year and exhibits high prevalence in other countries of Northern andWestern Europe as well [64]. Men over the age of 70 are most commonly affected by the lethal disease, whereas an indisposition before 50 is rare. The malignant prostate tumor can be healed through operation or irradiation while the cancer hasn’t reached the stage of metastasis in which other therapeutic methods have to be employed [14] [15]. In the metastatic phase, the patient usually exhibits symptoms when the tumors size affects the urethra or the cancer spreads to other tissue, often the bones [16].
The high prevalence of this disease marks the importance of further research into prognosis and diagnosis methods, whereby identification of further biomarkers in PCa poses a major topic of scientific analysis. For this task, the effectiveness of high-throughput RNA sequencing of the transcriptome (RNA molecules of an organism or specific cell type) is frequently exploited [66]. RNA sequencing or RNA-Seq in short, offers the possibility of transcriptome assessment, enabling the identification of transcriptional aberrations in diseases as well as uncharacterized RNA species such as non-coding RNAs (ncRNAs) which remain undetected by conventional methods [49]. To alleviate interpretation of the sequenced reads they are assembled to reconstruct the transcriptome as close to the original state as possible, thus enabling rapid detection of relevant biomolecules in the data [49]. Transcriptomic studies often require highly accurate and complete gene annotations on the reference genome of the examined organism. However, most gene annotations and reference genomes are far from complete, containing a multitude of unidentified protein-coding and non-coding genes and transcripts. Therefore, refinement of reference genomes and annotations by inclusion of novel sequences, discovered in high quality transcriptome assemblies, is necessary [24].
Cryptorchidism is the most common disorder of sex development in dogs. It describes a failure of one or both testes to descend into the scrotum in due time. It is a heritable multifactorial disease. In this work, selected dogs of a german sheep poodle breed were sequenced with nanopore sequencing and subsequently examined for genetic variations correlating with cryptorchidism. The relationships of the studied dogs were also analyzed and visually processed.
Our current research aims to establish a complete ribonucleic acid (RNA) production line from plasmid design to purification of in vitro transcribed RNA and labeling of RNA. RNA is the central molecule within the central dogma of molecular biology and is involved in most essential processes within a cell[1]. In many cases, only compact three-dimensional structures of the respective RNA are able to fulfill their function. In this context, RNA tertiary contacts such as kissing loops and pseudoknots are essential to stabilize three-dimensional folding[2]. We will produce a tertiary contact consisting of a kissing loop and a GAAA tetraloop that occurs in eukaryotic ribosomal RNA[3,4]. The RNA sequence is integrated into a vector plasmid. Subsequently, the plasmid is amplified in E. coli. After following plasmid purification steps, the RNA sequence will be transcribed in vitro[5,6]. In order for the RNA be used for Förster resonance energy transfer (FRET) experiments at the single molecule level, fluorescent dyes must be coupled to the RNA molecule[7].
The games industry has significantly grown over the last 30 years. Projects are getting bigger and more expensive, making it essential to plan, structure and track them more efficiently.
The growth of projects has increased the administrative workload for producers, project managers and leads, as they have to monitor and control the progress of the project in order to keep a permanent overview of the project. This is often accompanied by a lack of insight into the project and basic communication within the team. Therefore, the goal of this thesis is to enhance conventional project management methods with process structures that occur frequently in game development.
This thesis initially elaborates on what project management in the game industry actually is: Here, methods are considered, especially agile methods and progress tracking prac-tices, which were created for software development and have become a standard in game development. Subsequently, an example is used to demonstrate how process management can function within the development of video games. Based on this, the ideal is depicted, which is implemented and used in a tool at the German games studio KING Art GmbH. This ideal is compared with expert interviews in order to verify its gen-eral validity in the industry.
By integrating process structures, the administrative effort can be reduced, communica-tion within game development can be simplified, while the current project status can be permanently presented. This benefits both project management and leads, as well as the entire team. Further application tests of this theory would have to be organized to check scalability and to draw comparisons to other applications.
In the past few years, social media has become the most popular communication software, replacing phone calls, text messages, television and even advertisements. Social media has become the most important channel for spreading opinions. As a result of this trend, many politicians have also started to operate social media (Wang, Tsai, & Chen 2019). This study was conducted in order to understand whether there was an intercandidate agenda-setting effect between the Facebook posts of legislative candidates and presidential candidates during the election period, and whether the legislative candidates' Facebook posts were influenced by the presidential candidates' Facebook posts. The target population of this study was the three presidential candidates in Taiwan's 2020 presidential election — Dr. Tsai Ing-Wen, Mr. Han Kuo-Yu, and Mr. James Soong — as well as the 36 legislative candidates in Taipei, Taichung, and Kaohsiung.
The study focused on Facebook posts from 1thNovember 2019 to 10th January 2020, 10 weeks before the voting day. Text-mining and cosine similarity were used to organize the posts and compare the similarity between posts. Finally, the similarity between posts was presented as a line graph.
The study revealed that there was an inter-candidate agenda-setting effect between legislative candidate posts and presidential candidate posts, and that Dr. Tsai Ing-Wen, who was also the incumbent president during the campaign, was the most influential Facebook poster during the entire election.
Future research is proposed on the inter-candidate agenda-setting effect only analyzing the similarity of posts among the candidates to discuss the influence of the candidates' Facebook agenda-setting during a specific election period.
This is the first study in which the Facebook posts of Taiwanese politicians are analyzed and the relationships were analyzed and the relationships were systematically compared, across multiple degrees, which opens up a whole new subject for future elections in Taiwan.
Since its foundation as an application of algebra, coding theory is obtaining a day by day increasing importance. For instance, any communication system needs the concepts of coding theory to function efficiently. In this thesis, reader will find an introductory explanation to linear codes and binary hamming codes including some of the algebraic tools devised in their applications. All the described software applications are verified using SageMath 9.0 using Hochschule Mittweida’s JupyterHub.
In this work, a transgenic zebrafish line that expresses the fluorophore dsRed under the endogenous zebrafish cochlin promotor is supposed to be established, using the CRISPR/Cas9 system. dsRed was cloned into a pBluescript vector, followed by the cloning of the cochlin locus into this vector. This bait construct was then supposed to be micro injected into wild type AB zebrafish embryos. The micro injection of Cas9 mRNA, single guide RNA and a bait construct was practiced with the tyrosinase gene, which was disrupted using CRISPR/Cas9.